2. Test datasets
We provide seven test datasets generated from using Illumina HumanMethylation450 (450K), MethylationEPIC v1.0 (850K), MethylationEPIC v2.0 and RRBS.
2.1. Test data 1
Test data 1 |
|
---|---|
Source |
Mayo Clinic |
Tissue |
Blood |
Platform |
MethylationEPIC v1.0 (850K) |
# of CpG |
865859 |
# of samples |
20 |
Age range (year) |
(49, 82) |
Data file |
|
MD5 (Data file) |
528a5896bcaae4a77757c35c7abcd507 |
Meta info file |
2.2. Test data 2
Test data 2 |
|
---|---|
Source |
GEO (GSE56105) |
Tissue |
Blood |
Platform |
HumanMethylation450 (450K) |
# of CpG |
478313 |
# of samples |
80 |
Age range (year) |
(10, 60) |
Data file |
|
MD5 (Data file) |
95e5f8ca6ab10c015644a0ff03b4b7be |
Meta info file |
2.3. Test data 3
Test data 3 |
|
---|---|
Source |
Mayo Clinic |
Tissue |
Liver |
Platform |
HumanMethylation450 (450K) |
# of CpG |
485512 |
# of samples |
32 |
Age range (year) |
(2, 81) |
Data file |
|
MD5 (Data file) |
a868457bd3d50aadeb5f34d50ef82dc6 |
Meta info file |
2.4. Test data 4
Test data 4 |
|
---|---|
Source |
GEO (GSE229715) |
Tissue |
Brain |
Platform |
MethylationEPIC v2.0 |
# of CpG |
853304 |
# of samples |
16 |
Age range (year) |
(0.4, 77) |
Data file |
|
MD5 (Data file) |
ec566e0cf5b5dd48ed4797e132b326dd |
Meta info file |
2.5. Test data 5
Test data 5 |
|
---|---|
Source |
GEO (GSE62924) |
Tissue |
Cord Blood |
Platform |
450K |
# of CpG |
484667 |
# of samples |
38 |
Age range (week) |
(34, 41) |
Data file |
|
MD5 (Data file) |
0cf912f55a43dbbadaab8fd2371811be |
Meta info file |
2.6. Test data 6
Test data 6 |
|
---|---|
Source |
GEO (GSE44667) |
Tissue |
Placental chorionic villus |
Platform |
450K |
# of CpG |
430685 |
# of samples |
40 |
Age range (week) |
(24, 38) |
Data file |
|
MD5 (Data file) |
8cb8074657a8b8d1b11e96bd1cce4165 |
Meta info file |
2.7. Test data 7
Test data 7 |
|
---|---|
Source |
GEO (GSE121141) |
Tissue |
Mouse multiple tissue. |
Platform |
RRBS |
# of CpG |
994 |
# of samples |
81 |
Age range (days) |
(180, 900) |
Data file |
|
MD5 (Data file) |
98456e98a2ffddb9e78b048e048279fe |
Meta info file |